I've tried following the hello-world plugin tutorial using Atlassian-Plugin SDK 5.1.1, compiling the plugin works. And using atlas-mvn run does start a JIRA instance. The log show that my 'HelloWorld' plugin is ENABLED. But it does not show up in the list of installed add-ons.
What am I doing wrong?
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To answer my own question. This must have been a bug in the UPM shipped with JIRA 6.4.9. Upgrading to 6.4.10 resolves the problem.
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